Transcript: ENSDART00000038118.9 si:ch211-216p19.6-201

Description

si:ch211-216p19.6 [Source:ZFIN;Acc:ZDB-GENE-160728-7]

Location

About this transcript

This transcript has 7 exons, is associated with 348 variant alleles and maps to 350 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171085.3	si:ch211-216p19.6-203	1659	533aa	ENSDARP00000134995.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KRG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169737.2	si:ch211-216p19.6-202	1569	522aa	ENSDARP00000139571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000038118.9	si:ch211-216p19.6-201	1849	249aa	ENSDARP00000036656.8	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,849 bps, Translation length: 249 residues

Version

ENSDART00000038118.9

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.