Transcript: ENSDART00000038036.8 ube3d-201

Description

ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]

Gene Synonyms

ube2cbp

Location

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 579 variant alleles and maps to 159 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038036.8	ube3d-201	1513	388aa	ENSDARP00000030264.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7U1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150108.2	ube3d-203	751	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000149498.2	ube3d-202	499	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,513 bps, Translation length: 388 residues

Version

ENSDART00000038036.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.