Transcript: ENSDART00000037007.5 tpi1a-201

Description

triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]

Gene Synonyms

DrTPI-A

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 52 variant alleles and maps to 246 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000037007.5	tpi1a-201	1287	248aa	ENSDARP00000033907.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150952.2	tpi1a-202	949	163aa	ENSDARP00000125732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,287 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1MTI4

Version

ENSDART00000037007.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.