Transcript: ENSDART00000036801.7 slc17a9a-201

Description

solute carrier family 17 member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]

Gene Synonyms

gb:dr724030, si:ch211-196c10.7

Location

About this transcript

This transcript has 13 exons, is annotated with 22 domains and features, is associated with 401 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000036801.7	slc17a9a-201	1843	458aa	ENSDARP00000034763.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000184298.1	slc17a9a-202	4205	407aa	ENSDARP00000145723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RIJ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,843 bps, Translation length: 458 residues

Version

ENSDART00000036801.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.