Transcript: ENSDART00000036668.6 psmc1a-201

Description

proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]

Gene Synonyms

psmc1, wu:fb05d04

Location

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features, is associated with 905 variant alleles and maps to 171 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000036668.6	psmc1a-201	2248	440aa	ENSDARP00000030555.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8KC30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150214.3	psmc1a-202	589	94aa	ENSDARP00000124034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3U0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,248 bps, Translation length: 440 residues

Version

ENSDART00000036668.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.