Transcript: ENSDART00000035905.6 sumo3a-201

Description

small ubiquitin like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]

Gene Synonyms

fa94a11, im:7141764, sumo3, sumo3l, wu:fa94a11, wu:fb55d09, zgc:65847, zgc:85643

Location

About this transcript

This transcript has 4 exons, is annotated with 18 domains and features, is associated with 291 variant alleles and maps to 274 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035905.6	sumo3a-201	1487	94aa	ENSDARP00000035513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NV25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143730.3	sumo3a-204	961	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146577.2	sumo3a-206	825	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000144524.3	sumo3a-205	808	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000142530.2	sumo3a-203	723	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000141017.3	sumo3a-202	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,487 bps, Translation length: 94 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NV25

Version

ENSDART00000035905.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.