Transcript: ENSDART00000035093.9 COL9A2-203

Description

procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]

Location

About this transcript

This transcript has 32 exons, is annotated with 49 domains and features, is associated with 791 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035093.9	COL9A2-203	3163	691aa	ENSDARP00000037624.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148139.2	COL9A2-202	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140198.2	COL9A2-201	720	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 32, Coding exons: 32, Transcript length: 3,163 bps, Translation length: 691 residues

Version

ENSDART00000035093.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.