Transcript: ENSDART00000034913.6 SGMS1-203

Description

sphingomyelin synthase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-201]

Location

Chromosome 17: 23,730,089-23,765,067 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 28 domains and features, is associated with 737 variant alleles and maps to 286 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057053.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135561.2	SGMS1-201	3856	419aa	ENSDARP00000122611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3Z9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179026.2	SGMS1-202	4087	419aa	ENSDARP00000144395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3Z9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000034913.6	SGMS1-203	3870	419aa	ENSDARP00000031713.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3Z9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 3,870 bps, Translation length: 419 residues

Version

ENSDART00000034913.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000034913.6 SGMS1-203

Summary

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Transcript: ENSDART00000034913.6 SGMS1-203

Summary

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