Transcript: ENSDART00000034865.5 hccsa.1-201

Description

holocytochrome c synthase a [Source:ZFIN;Acc:ZDB-GENE-040718-202]

Gene Synonyms

hccsa, zgc:92841

Location

Chromosome 2: 14,998,612-15,033,163 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 404 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000028131.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034865.5	hccsa.1-201	1120	276aa	ENSDARP00000029466.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191478.1	hccsa.1-204	1783	276aa	ENSDARP00000147404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPK2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145974.3	hccsa.1-203	1086	276aa	ENSDARP00000117237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPK2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131835.2	hccsa.1-202	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,120 bps, Translation length: 276 residues

Version

ENSDART00000034865.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000034865.5 hccsa.1-201

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Transcript: ENSDART00000034865.5 hccsa.1-201

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