Transcript: ENSDART00000034704.7 slc25a3b-201

Description

solute carrier family 25 member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]

Gene Synonyms

slc25a3, wu:fb59a06, zgc:56226, zgc:85664

Location

Chromosome 25: 3,306,689-3,321,365 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 689 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000025566.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034704.7	slc25a3b-201	1443	356aa	ENSDARP00000033622.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000182085.1	slc25a3b-205	1279	355aa	ENSDARP00000156002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RYH8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000137077.2	slc25a3b-202	957	279aa	ENSDARP00000115868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJ49	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146154.2	slc25a3b-204	674	106aa	ENSDARP00000122956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVY4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000142120.2	slc25a3b-203	727	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,443 bps, Translation length: 356 residues

Version

ENSDART00000034704.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000034704.7 slc25a3b-201

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Transcript: ENSDART00000034704.7 slc25a3b-201

Summary

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