Transcript: ENSDART00000034639.10 ugt2a1-201

Description

UDP glucuronosyltransferase 2 family, polypeptide A1 [Source:ZFIN;Acc:ZDB-GENE-080721-20]

Gene Synonyms

zgc:112490, zgc:112491

Location

Chromosome 5: 69,926,766-69,948,099 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 531 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000051940.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034639.10	ugt2a1-201	2106	543aa	ENSDARP00000028543.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000124954.3	ugt2a1-203	2097	533aa	ENSDARP00000111031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH37	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000127782.4	ugt2a1-204	2095	534aa	ENSDARP00000109851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JMA7	-
ENSDART00000097357.5	ugt2a1-202	1805	532aa	ENSDARP00000088127.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JMA8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000191111.1	ugt2a1-207	1085	262aa	ENSDARP00000151943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185924.1	ugt2a1-205	999	250aa	ENSDARP00000146113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000188557.1	ugt2a1-206	822	246aa	ENSDARP00000156371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,106 bps, Translation length: 543 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000034639.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000034639.10 ugt2a1-201

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Transcript: ENSDART00000034639.10 ugt2a1-201

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