Transcript: ENSDART00000034580.8 calm1a-201

Description

calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]

Gene Synonyms

CALMx2, CaMbeta, sb:cb617, wu:fb08d09, wu:fb69c08, wu:fj34a08, zgc:63926

Location

About this transcript

This transcript has 6 exons, is annotated with 407 domains and features, is associated with 282 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034580.8	calm1a-201	1576	149aa	ENSDARP00000035027.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQW3 Q6PI52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186813.1	calm1a-203	450	149aa	ENSDARP00000156858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GQW3 Q6PI52	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134810.2	calm1a-202	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,576 bps, Translation length: 149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PI52

Version

ENSDART00000034580.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.