Transcript: ENSDART00000034225.9 CNTN5-202

Description

contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]

Location

About this transcript

This transcript has 13 exons, is annotated with 38 domains and features, is associated with 3232 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000098641.5	CNTN5-204	4037	1056aa	ENSDARP00000089412.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000098639.5	CNTN5-203	3439	804aa	ENSDARP00000089410.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000034225.9	CNTN5-202	1802	601aa	ENSDARP00000038528.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000124211.3	CNTN5-201	1730	305aa	ENSDARP00000107091.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,802 bps, Translation length: 601 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000034225.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.