Transcript: ENSDART00000034078.6 psmc4-201

Description

proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]

Gene Synonyms

wu:fe38b10, zgc:63709

Location

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features, is associated with 761 variant alleles and maps to 303 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034078.6	psmc4-201	1941	418aa	ENSDARP00000034904.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R1D0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134718.2	psmc4-202	226	75aa	ENSDARP00000121136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5E3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,941 bps, Translation length: 418 residues

Version

ENSDART00000034078.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.