Transcript: ENSDART00000033980.7 lims1-201

Description

LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]

Gene Synonyms

pinch1, wu:fc32c03, zgc:112533

Location

About this transcript

This transcript has 10 exons, is annotated with 37 domains and features, is associated with 640 variant alleles and maps to 343 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000033980.7	lims1-201	3817	336aa	ENSDARP00000035109.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179756.1	lims1-202	4355	325aa	ENSDARP00000149833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,817 bps, Translation length: 336 residues

Version

ENSDART00000033980.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]