Transcript: ENSDART00000033848.9 brf1a-201

Description

BRF1ral transcription factor IIIB subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]

Gene Synonyms

brf1, wu:fi47f03, zgc:55543

Location

About this transcript

This transcript has 19 exons, is annotated with 31 domains and features, is associated with 1041 variant alleles and maps to 376 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033848.9	brf1a-201	5076	661aa	ENSDARP00000029653.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9S3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158709.2	brf1a-203	2007	661aa	ENSDARP00000132978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9S3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139650.3	brf1a-202	465	86aa	ENSDARP00000114528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 5,076 bps, Translation length: 661 residues

Version

ENSDART00000033848.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.