Transcript: ENSDART00000032996.6 ppdpfa-201

Description

pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]

Gene Synonyms

c20orf149, c20orf149a, cb1048, exdpf, exocrine differentiation and proliferation factor, fb65a03, id:ibd5154, wu:fb65a03

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 275 variant alleles and maps to 194 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000032996.6	ppdpfa-201	872	117aa	ENSDARP00000031112.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PFP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137536.2	ppdpfa-202	681	90aa	ENSDARP00000120257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139442.2	ppdpfa-203	940	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 872 bps, Translation length: 117 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PFP3

Version

ENSDART00000032996.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.