Transcript: ENSDART00000032407.4 prf1.6-201

Description

perforin 1.6 [Source:ZFIN;Acc:ZDB-GENE-070410-126]

Gene Synonyms

prf8b, zgc:163021

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 235 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000032407.4	prf1.6-201	3103	516aa	ENSDARP00000030227.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0K4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143623.2	prf1.6-202	907	225aa	ENSDARP00000122637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0K5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,103 bps, Translation length: 516 residues

Version

ENSDART00000032407.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.