Transcript: ENSDART00000031616.6 mical1-201

Description

microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081022-3]

Gene Synonyms

zgc:171928

Location

Chromosome 23: 39,462,206-39,490,351 forward strand.

About this transcript

This transcript has 6 exons, is associated with 397 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011809.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136707.2	mical1-202	3920	1227aa	ENSDARP00000121526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000187222.1	mical1-204	4513	1214aa	ENSDARP00000154178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9T0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184761.1	mical1-203	4002	1214aa	ENSDARP00000155850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9T0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000031616.6	mical1-201	1212	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,212 bps,

Version

ENSDART00000031616.6

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000031616.6 mical1-201

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Transcript: ENSDART00000031616.6 mical1-201

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