Transcript: ENSDART00000030646.5 six6a-201

Description

SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]

Gene Synonyms

zgc:63871

Location

About this transcript

This transcript has 2 exons, is annotated with 15 domains and features, is associated with 110 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000030646.5	six6a-201	1255	245aa	ENSDARP00000030834.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T3G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000111763.4	six6a-202	974	245aa	ENSDARP00000098430.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T3G8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,255 bps, Translation length: 245 residues

Version

ENSDART00000030646.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.