Transcript: ENSDART00000030213.6 MAPK1-201

Description

mitogen-activated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-2]

Gene Synonyms

zERK2

Location

Chromosome 5: 13,104,851-13,167,120 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 1468 variant alleles and maps to 295 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027552.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000030213.6	MAPK1-201	1641	369aa	ENSDARP00000038550.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149700.2	MAPK1-202	1411	369aa	ENSDARP00000123916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150095.2	MAPK1-203	607	99aa	ENSDARP00000124354.1	Nonsense mediated decay	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000149440.2	MAPK1-204	904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,641 bps, Translation length: 369 residues

Version

ENSDART00000030213.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000030213.6 MAPK1-201

Summary

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Transcript: ENSDART00000030213.6 MAPK1-201

Summary

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