Transcript: ENSDART00000029727.7 atg5-201

Description

ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]

Gene Synonyms

apg5l, zgc:100934

Location

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 834 variant alleles and maps to 282 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149086.2	atg5-202	2264	275aa	ENSDARP00000124077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000029727.7	atg5-201	2222	275aa	ENSDARP00000030870.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDC0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,222 bps, Translation length: 275 residues

Version

ENSDART00000029727.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.