Transcript: ENSDART00000029668.9 LRRK1-202

Description

leucine-rich repeat kinase 1 [Source:ZFIN;Acc:ZDB-GENE-101019-2]

Location

About this transcript

This transcript has 26 exons, is annotated with 54 domains and features, is associated with 2550 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000029668.9	LRRK1-202	4285	1377aa	ENSDARP00000033785.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000127974.4	LRRK1-201	1850	585aa	ENSDARP00000106476.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000187902.1	LRRK1-203	1724	444aa	ENSDARP00000154352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 4,285 bps, Translation length: 1,377 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000029668.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]