Transcript: ENSDART00000029386.7 slc4a1a-202

Description

solute carrier family 4 member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]

Gene Synonyms

AE1/band 3, band3, erythroid anion exchanger 1, ret, retsina, si:dz180g5.1, slc4a1, zAE1a, zgc:111889, zgc:152771

Location

Chromosome 3: 20,065,861-20,091,964 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 75 domains and features, is associated with 510 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012881.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124326.4	slc4a1a-203	3554	905aa	ENSDARP00000110238.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZZJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000029386.7	slc4a1a-202	3463	905aa	ENSDARP00000032458.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZZJ7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000020253.6	slc4a1a-201	2859	904aa	ENSDARP00000005654.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 3,463 bps, Translation length: 905 residues

Version

ENSDART00000029386.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000029386.7 slc4a1a-202

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Transcript: ENSDART00000029386.7 slc4a1a-202

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