Transcript: ENSDART00000029122.7 zgc:165539-201

Description

zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]

Gene Synonyms

fd19g12, wu:fd19g12

Location

Chromosome 10: 21,541,927-21,545,091 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 563 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027639.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000132207.2	zgc:165539-202	2081	637aa	ENSDARP00000116942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000029122.7	zgc:165539-201	2079	529aa	ENSDARP00000036766.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000134502.2	zgc:165539-204	622	189aa	ENSDARP00000116487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146761.2	zgc:165539-205	599	181aa	ENSDARP00000119784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132246.2	zgc:165539-203	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 2,079 bps, Translation length: 529 residues

Version

ENSDART00000029122.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000029122.7 zgc:165539-201

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Transcript: ENSDART00000029122.7 zgc:165539-201

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