Transcript: ENSDART00000028820.7 mkln1-201

Description

muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]

Gene Synonyms

fc60a07, wu:fc60a07

Location

Chromosome 4: 11,723,852-11,728,851 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 314 variant alleles and maps to 55 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000025576.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137736.4	mkln1-202	3926	729aa	ENSDARP00000113321.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AYJ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150624.3	mkln1-204	721	208aa	ENSDARP00000125222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000028820.7	mkln1-201	487	162aa	ENSDARP00000036908.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000150275.2	mkln1-203	674	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000150669.2	mkln1-205	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 487 bps, Translation length: 162 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000028820.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000028820.7 mkln1-201

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Transcript: ENSDART00000028820.7 mkln1-201

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