Transcript: ENSDART00000027959.10 RACGAP1-203

Description

Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]

Location

About this transcript

This transcript has 17 exons, is annotated with 19 domains and features, is associated with 5 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027959.10	RACGAP1-203	2719	654aa	ENSDARP00000020703.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P3H8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000160116.2	RACGAP1-204	5972	639aa	ENSDARP00000141431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZK0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132147.2	RACGAP1-202	1389	439aa	ENSDARP00000116910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143638.2	RACGAP1-201	845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,719 bps, Translation length: 654 residues

Version

ENSDART00000027959.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.