Transcript: ENSDART00000027864.9 hnrnpr-201

Description

heteroous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]

Gene Synonyms

hnrpr, wu:cegs2571, wu:fb97a09, wu:fe01h03, zgc:56523

Location

Chromosome 19: 79,962-82,504 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 131 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014569.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000159815.3	hnrnpr-202	4165	637aa	ENSDARP00000134461.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000160560.3	hnrnpr-203	2649	631aa	ENSDARP00000137219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166009.2	hnrnpr-205	936	159aa	ENSDARP00000133587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000172319.2	hnrnpr-206	851	269aa	ENSDARP00000139065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000027864.9	hnrnpr-201	848	230aa	ENSDARP00000016984.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165328.2	hnrnpr-204	817	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 848 bps, Translation length: 230 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000027864.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000027864.9 hnrnpr-201

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Transcript: ENSDART00000027864.9 hnrnpr-201

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