Transcript: ENSDART00000027666.11 nr2f6b-201

Description

nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]

Gene Synonyms

EAR2-B, fc72d04, nr2f6, wu:fc72d04, zgc:77260

Location

Chromosome 11: 6,115,669-6,133,580 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 36 domains and features, is associated with 660 variant alleles and maps to 260 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003165.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027666.11	nr2f6b-201	2382	404aa	ENSDARP00000002435.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P115	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176170.2	nr2f6b-205	3729	404aa	ENSDARP00000144340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P115	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165031.2	nr2f6b-204	986	209aa	ENSDARP00000130719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000161458.2	nr2f6b-203	603	56aa	ENSDARP00000136646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159680.2	nr2f6b-202	467	104aa	ENSDARP00000137164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,382 bps, Translation length: 404 residues

Version

ENSDART00000027666.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000027666.11 nr2f6b-201

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Transcript: ENSDART00000027666.11 nr2f6b-201

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