Transcript: ENSDART00000027563.10 ccdc9-201

Description

coiled-coil domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060929-520]

Location

Chromosome 15: 26,904,635-26,931,541 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 33 domains and features, is associated with 1079 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004636.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027563.10	ccdc9-201	2862	669aa	ENSDARP00000022739.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R420	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126046.4	ccdc9-202	4190	685aa	ENSDARP00000109950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCF9	-
ENSDART00000181674.1	ccdc9-204	4142	669aa	ENSDARP00000150133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R420	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132459.2	ccdc9-203	212	71aa	ENSDARP00000117318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,862 bps, Translation length: 669 residues

Version

ENSDART00000027563.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000027563.10 ccdc9-201

Summary

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Transcript: ENSDART00000027563.10 ccdc9-201

Summary

About Us

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