Zebrafish (GRCz11)
Description

protein tyrosine phosphatase 4A1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]

Gene Synonyms

PRL-1, fb54d08, fc01c04, wu:fb54d08, wu:fc01c04, zgc:101726

Location
About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 394 variant alleles and maps to 196 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeUniProt MatchFlags
ENSDART00000026814.10ptp4a1-2012002173aaENSDARP00000023049.7
 
Protein coding
F1QSC9 Ensembl CanonicalAPPRIS P1
ENSDART00000148425.3ptp4a1-2031411203aaENSDARP00000124821.2
 
Protein coding
F8W283 -
ENSDART00000173346.2ptp4a1-20882180aaENSDARP00000142090.1
 
Protein coding
A0A140LFR6 CDS 3' incomplete
ENSDART00000129843.3ptp4a1-202727164aaENSDARP00000106040.2
 
Protein coding
E7FA71 CDS 5' incomplete
ENSDART00000190678.1ptp4a1-209541173aaENSDARP00000145165.1
 
Protein coding
F1QSC9 APPRIS P1
ENSDART00000151926.2ptp4a1-20413544aaENSDARP00000126441.1
 
Protein coding
K7DYB3 -
ENSDART00000169001.2ptp4a1-2061109184aaENSDARP00000137525.1
 
Nonsense mediated decay
A0A0R4IN05 -
ENSDART00000166489.2ptp4a1-205806201aaENSDARP00000139705.1
 
Nonsense mediated decay
A0A0R4IXJ0 CDS 5' incomplete
ENSDART00000172939.2ptp4a1-207942No protein-
 
Retained intron
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Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,002 bps, Translation length: 173 residues

Version

ENSDART00000026814.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.