Transcript: ENSDART00000026559.8 cd9b-201

Description

CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]

Gene Synonyms

cd9l, fb82b11, wu:fb82b11, zgc:56512

Location

Chromosome 4: 4,235,305-4,259,102 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 26 domains and features, is associated with 129 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000016691.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026559.8	cd9b-201	859	231aa	ENSDARP00000026201.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L9G6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000103319.5	cd9b-203	1125	227aa	ENSDARP00000094096.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000103316.5	cd9b-202	934	224aa	ENSDARP00000094093.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000135352.3	cd9b-204	817	160aa	ENSDARP00000115141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000150279.3	cd9b-206	739	227aa	ENSDARP00000125367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150694.2	cd9b-207	711	121aa	ENSDARP00000125557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147804.2	cd9b-205	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 859 bps, Translation length: 231 residues

Version

ENSDART00000026559.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000026559.8 cd9b-201

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Transcript: ENSDART00000026559.8 cd9b-201

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