Transcript: ENSDART00000026551.6 SRPX-202

Description

sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]

Location

About this transcript

This transcript has 10 exons, is annotated with 26 domains and features, is associated with 634 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026551.6	SRPX-202	1671	448aa	ENSDARP00000023792.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58ED3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133004.2	SRPX-201	381	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000148148.2	SRPX-203	805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,671 bps, Translation length: 448 residues

Version

ENSDART00000026551.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.