Transcript: ENSDART00000026011.9 efnb2a-201

Description

ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]

Gene Synonyms

efnb2, ephrin-B2a, id:ibd5072

Location

About this transcript

This transcript has 5 exons, is annotated with 27 domains and features, is associated with 419 variant alleles and maps to 170 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026011.9	efnb2a-201	4598	332aa	ENSDARP00000010432.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0CLY3 O73874	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141584.2	efnb2a-202	840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144999.2	efnb2a-203	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,598 bps, Translation length: 332 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O73874

Version

ENSDART00000026011.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.