Transcript: ENSDART00000025852.10 tnni2b.1-201

Description

troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]

Gene Synonyms

tropI-2a, zgc:110715

Location

Chromosome 7: 39,402,864-39,406,763 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 4 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035958.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025852.10	tnni2b.1-201	999	176aa	ENSDARP00000023228.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144750.3	tnni2b.1-203	990	176aa	ENSDARP00000120317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCC0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147037.3	tnni2b.1-204	506	133aa	ENSDARP00000123349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136736.2	tnni2b.1-202	1101	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000173783.2	tnni2b.1-205	677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 999 bps, Translation length: 176 residues

Version

ENSDART00000025852.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000025852.10 tnni2b.1-201

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Transcript: ENSDART00000025852.10 tnni2b.1-201

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