Transcript: ENSDART00000025782.9 NUP93-202

Description

nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]

Location

Chromosome 18: 17,537,344-17,577,970 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 9 domains and features, is associated with 855 variant alleles and maps to 346 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003487.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025782.9	NUP93-202	3145	820aa	ENSDARP00000013627.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179783.1	NUP93-204	5816	820aa	ENSDARP00000146697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV08	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147839.2	NUP93-203	511	110aa	ENSDARP00000121567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144960.2	NUP93-201	855	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 3,145 bps, Translation length: 820 residues

Version

ENSDART00000025782.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000025782.9 NUP93-202

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Transcript: ENSDART00000025782.9 NUP93-202

Summary

About Us

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