Transcript: ENSDART00000025612.6 phyhd1-201

Description

phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]

Gene Synonyms

zgc:101639

Location

Chromosome 21: 4,509,483-4,525,073 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 5 domains and features, is associated with 413 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029905.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147187.3	phyhd1-203	1452	291aa	ENSDARP00000123099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3U0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000025612.6	phyhd1-201	1341	291aa	ENSDARP00000015072.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3U0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140432.4	phyhd1-202	1031	256aa	ENSDARP00000124422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148910.3	phyhd1-204	836	204aa	ENSDARP00000124739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,341 bps, Translation length: 291 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5U3U0

Version

ENSDART00000025612.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000025612.6 phyhd1-201

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Transcript: ENSDART00000025612.6 phyhd1-201

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