Transcript: ENSDART00000025451.7 rassf7b-201

Description

Ras association domain family member 7b [Source:ZFIN;Acc:ZDB-GENE-030429-1]

Location

Chromosome 7: 49,654,588-49,690,676 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 20 domains and features, is associated with 660 variant alleles and maps to 295 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003193.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025451.7	rassf7b-201	1711	427aa	ENSDARP00000027148.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJA9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192172.1	rassf7b-207	4078	421aa	ENSDARP00000150058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000176372.2	rassf7b-206	2919	427aa	ENSDARP00000144476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJA9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137059.2	rassf7b-203	948	232aa	ENSDARP00000113356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131210.2	rassf7b-202	856	201aa	ENSDARP00000121608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141934.3	rassf7b-204	408	90aa	ENSDARP00000116482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144878.2	rassf7b-205	811	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,711 bps, Translation length: 427 residues

Version

ENSDART00000025451.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000025451.7 rassf7b-201

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Transcript: ENSDART00000025451.7 rassf7b-201

Summary

About Us

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