Transcript: ENSDART00000025171.9 YTHDF1-202

Description

YTH N6-methyladenosine RNA binding protein F1 [Source:ZFIN;Acc:ZDB-GENE-040426-2786]

Location

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features, is associated with 257 variant alleles and maps to 214 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025171.9	YTHDF1-202	4168	614aa	ENSDARP00000005746.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q802Z0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184512.1	YTHDF1-203	2323	614aa	ENSDARP00000153154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q802Z0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145684.2	YTHDF1-201	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,168 bps, Translation length: 614 residues

Version

ENSDART00000025171.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.