Transcript: ENSDART00000024627.11 CDH2-201

Description

cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]

Gene Synonyms

bib, glo, lyr, ncad, pac, wu:fb47h04

Location

About this transcript

This transcript has 16 exons, is annotated with 66 domains and features, is associated with 2160 variant alleles and maps to 251 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000024627.11	CDH2-201	4853	893aa	ENSDARP00000003949.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182832.1	CDH2-203	2809	869aa	ENSDARP00000149074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000181946.1	CDH2-202	2429	782aa	ENSDARP00000156615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 4,853 bps, Translation length: 893 residues

Version

ENSDART00000024627.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]