Transcript: ENSDART00000024433.9 SLC5A9-201

Description

solute carrier family 5 member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]

Location

About this transcript

This transcript has 13 exons, is annotated with 60 domains and features, is associated with 191 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024433.9	SLC5A9-201	2188	657aa	ENSDARP00000008333.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141185.2	SLC5A9-202	522	116aa	ENSDARP00000117713.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,188 bps, Translation length: 657 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A8WHP3

Version

ENSDART00000024433.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.