Transcript: ENSDART00000023904.10 ppa2-201

Description

inorganic pyrophosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1857]

Gene Synonyms

zgc:77715

Location

About this transcript

This transcript has 12 exons, is associated with 152 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160183.2	ppa2-202	2953	339aa	ENSDARP00000138824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000023904.10	ppa2-201	1446	93aa	ENSDARP00000007548.9	Nonsense mediated decay	-	-
ENSDART00000169642.2	ppa2-204	816	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000171614.2	ppa2-205	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000167489.2	ppa2-203	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 3, Transcript length: 1,446 bps, Translation length: 93 residues

Version

ENSDART00000023904.10

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.