Transcript: ENSDART00000023833.6 eif2s3-201

Description

eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]

Gene Synonyms

eukaryotic translation initiation factor 2 gamma, fi03g03, wu:fi03g03, wu:fi37d04, zgc:63805

Location

About this transcript

This transcript has 12 exons, is annotated with 20 domains and features, is associated with 405 variant alleles and maps to 238 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023833.6	eif2s3-201	2112	472aa	ENSDARP00000027695.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139176.3	eif2s3-203	884	258aa	ENSDARP00000121353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135580.2	eif2s3-202	839	279aa	ENSDARP00000116875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000145520.2	eif2s3-204	274	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,112 bps, Translation length: 472 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1QGW6

Version

ENSDART00000023833.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.