Transcript: ENSDART00000023210.10 trim13-201

Description

tripartite motif containing 13 [Source:ZFIN;Acc:ZDB-GENE-050522-516]

Gene Synonyms

zgc:110578

Location

About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 141 variant alleles and maps to 312 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023210.10	trim13-201	2775	414aa	ENSDARP00000013495.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9KUW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175160.2	trim13-203	1493	414aa	ENSDARP00000143359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9KUW1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157265.2	trim13-202	2077	414aa	ENSDARP00000129064.1	Nonsense mediated decay	H9KUW1	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,775 bps, Translation length: 414 residues

Version

ENSDART00000023210.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.