Transcript: ENSDART00000023123.8 nup88-201

Description

nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]

Gene Synonyms

ik:tdsubc_2f7, wu:fb16f10, wu:fb33e09, xx:tdsubc_2f7, zgc:112439

Location

About this transcript

This transcript has 17 exons, is annotated with 5 domains and features, is associated with 481 variant alleles and maps to 252 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023123.8	nup88-201	2410	720aa	ENSDARP00000025718.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CEI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,410 bps, Translation length: 720 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2CEI4

Version

ENSDART00000023123.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.