Transcript: ENSDART00000023058.8 efhc1-201

Description

EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]

Gene Synonyms

zgc:63931

Location

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 11 variant alleles and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023058.8	efhc1-201	2161	554aa	ENSDARP00000007503.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8A4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188862.1	efhc1-203	306	102aa	ENSDARP00000156132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RYP8	-
ENSDART00000186275.1	efhc1-202	306	102aa	ENSDARP00000155048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QPS8	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,161 bps, Translation length: 554 residues

Version

ENSDART00000023058.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.