Transcript: ENSDART00000022803.8 snx10a-201

Description

sorting nexin 10a [Source:ZFIN;Acc:ZDB-GENE-050809-44]

Gene Synonyms

im:7153949

Location

Chromosome 19: 18,118,321-18,130,567 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 3 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004405.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000190659.1	snx10a-204	1741	229aa	ENSDARP00000150398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q506-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187722.1	snx10a-203	1880	147aa	ENSDARP00000147490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000022803.8	snx10a-201	1609	229aa	ENSDARP00000025688.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q506-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000108627.5	snx10a-202	1567	229aa	ENSDARP00000098673.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q506-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,609 bps, Translation length: 229 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1Q506

Version

ENSDART00000022803.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000022803.8 snx10a-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000022803.8 snx10a-201

Summary

About Us

Get help

Our sister sites

Follow us