Transcript: ENSDART00000022586.10 lrrc40-201

Description

leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]

Gene Synonyms

fi33a12, wu:fi33a12, zgc:63729

Location

About this transcript

This transcript has 15 exons, is annotated with 51 domains and features, is associated with 467 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000022586.10	lrrc40-201	2217	601aa	ENSDARP00000016699.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144391.2	lrrc40-203	916	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000140921.2	lrrc40-202	850	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,217 bps, Translation length: 601 residues

Version

ENSDART00000022586.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.