Transcript: ENSDART00000022526.11 GTPBP3-203

Description

GTP binding protein 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050522-335]

Location

Chromosome 11: 6,010,177-6,037,759 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 21 domains and features, is associated with 695 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000018650.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000022526.11	GTPBP3-203	1664	500aa	ENSDARP00000004190.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000185680.1	GTPBP3-204	1889	489aa	ENSDARP00000150831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000170047.2	GTPBP3-205	1557	471aa	ENSDARP00000138822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000188999.1	GTPBP3-206	1344	447aa	ENSDARP00000155544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000161001.2	GTPBP3-202	818	239aa	ENSDARP00000136836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000166488.2	GTPBP3-201	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,664 bps, Translation length: 500 residues

Version

ENSDART00000022526.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000022526.11 GTPBP3-203

Summary

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Transcript: ENSDART00000022526.11 GTPBP3-203

Summary

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