Transcript: ENSDART00000022379.9 nr2f6a-201

Description

nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]

Gene Synonyms

COUP(II), EAR2-A, couptf2, fc94g11, wu:fc94g11, zgc:77259

Location

About this transcript

This transcript has 5 exons, is annotated with 39 domains and features, is associated with 229 variant alleles and maps to 243 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000022379.9	nr2f6a-201	2912	402aa	ENSDARP00000009513.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P117	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133818.2	nr2f6a-202	800	88aa	ENSDARP00000119818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135323.2	nr2f6a-203	729	243aa	ENSDARP00000115445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,912 bps, Translation length: 402 residues

Version

ENSDART00000022379.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.